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Laboratory of Computational, Quantitative and Synthetic Biology (CQSB)
UMR 7238 CNRS - Sorbonne Université
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    • Genetic Networks
    • Horizontal Evolution of Algal Lifestyles (HEAL)
    • Mathematical Modeling in Biology
    • Molecular Modeling and Drug Discovery (M2D2)
    • Proteome Diversification in Evolution
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Read more about the article MetaCLADE
Genome Organisation / NGS data analysis / Software

MetaCLADE

A novel profile-based domain annotation pipeline based on the multi-source domain annotation strategy.

Comments Off on MetaCLADE
10 November 2024
Read more about the article Joint Read Alignment
Genome Organisation / NGS data analysis / Software

Joint Read Alignment

A split-alignment tool to infer structural variants (currently implemented for deletions only) from large short-read datasets.

Comments Off on Joint Read Alignment
8 November 2024
Read more about the article Ulysses
Genome Organisation / NGS data analysis / Software

Ulysses

Detection of low-frequency structural variations in large insert-size sequencing libraries 

0 Comments
1 October 2024
Read more about the article Parseq
NGS data analysis / Software

Parseq

Parseq Infer transcription level from RNA-Seq read counts.<!– wp:paragraph –> <!– /wp:paragraph –>

0 Comments
5 September 2024
Read more about the article BSHMM
NGS data analysis / Software

BSHMM

Accurate and flexible methods for DNA methylation analysis, based on hidden Markov models 

0 Comments
1 September 2024
Fiona
NGS data analysis / Software

Fiona

Automatic correction of read error from genome sequencing experiments. 

0 Comments
30 August 2024
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Sorbonne Université

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